BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C09SP1|AL428879
(854 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1789 1655 0.0
>3x_Contig1789
Length = 30977
Score = 1655 bits (833), Expect = 0.0
Identities = 848/854 (99%), Gaps = 1/854 (0%)
Strand = Plus / Minus
Query: 1 atttgtgggaccaaacgtaccattgaaacagaacctcaatatacaatcgtacgattcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16275 atttgtgggaccaaacgtaccattgaaacagaacctcaatatacaatcgtacgattcaat 16216
Query: 61 gggtaagcttcatggcagacgcattccgaataacgaagagtatgacgataatgattccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16215 gggtaagcttcatggcagacgcattccgaataacgaagagtatgacgataatgattccat 16156
Query: 121 tgaagaaggcggatttttttcaaaattgtgctgtggaatttgctagcccattttttaggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16155 tgaagaaggcggatttttttcaaaattgtgctgtggaatttgctagcccattttttaggc 16096
Query: 181 ccatgacgagaagatgtattataagtnaatttaaccctccttacctatttgttgtcctgt 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 16095 ccatgacgagaagatgtattataagttaatttaaccctccttacctatttgttgtcctgt 16036
Query: 241 tgtaagagctgaaaagcgcgttgatcgtctgggttctccaataacaggcacacacggata 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16035 tgtaagagctgaaaag-gcgttgatcgtctgggttctccaataacaggcacacacggata 15977
Query: 301 catttaacgctgagcgttttgcttttataattttttttccaaggcaagaaggaacctttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15976 catttaacgctgagcgttttgcttttataattttttttccaaggcaagaaggaacctttc 15917
Query: 361 atatctttgtgtctctcccattcccatgatctttctcgctcggttcgcatttattagaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15916 atatctttgtgtctctcccattcccatgatctttctcgctcggttcgcatttattagaca 15857
Query: 421 aacttacacccttgctttagctgaggagaactgacaaattacatgaacatccagatatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15856 aacttacacccttgctttagctgaggagaactgacaaattacatgaacatccagatatgt 15797
Query: 481 aaatagaaatacatattcataatattttactttactttaatataaatbgtaatttagttt 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 15796 aaatagaaatacatattcataatattttactttactttaatataaattgtaatttagttt 15737
Query: 541 caaggaacttaaataacgaattaagcacttgaagagtatatttaatcattgaattattta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15736 caaggaacttaaataacgaattaagcacttgaagagtatatttaatcattgaattattta 15677
Query: 601 tyagctgatagtaagtcaaatttgaagtgaatgcaatgcaatataatttccacatgggta 660
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15676 ttagctgatagtaagttaaatttgaagtgaatgcaatgcaatataatttccacatgggta 15617
Query: 661 acaggtttcaatgaattgcagaaggtgattsagggaggtgaacgggtatcataagccttc 720
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 15616 acaggtttcaatgaattgcagaaggtgattgagggaggtgaacgggtatcataagccttc 15557
Query: 721 gcatacaaatgtggcatcgctgcctcttctaatgccagacagaagagggattgtgggtat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15556 gcatacaaatgtggcatcgctgcctcttctaatgccagacagaagagggattgtgggtat 15497
Query: 781 atcgaatgaatgggttttaccgtcaaacatgctatctagtgcaggcgtcattggagaatg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15496 atcgaatgaatgggttttaccgtcaaacatgctatctagtgcaggcgtcattggagaatg 15437
Query: 841 ggcttcgtattcca 854
||||||||||||||
Sbjct: 15436 ggcttcgtattcca 15423
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6200
Number of Sequences: 1807
Number of extensions: 6200
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 854
length of database: 10,358,551
effective HSP length: 16
effective length of query: 838
effective length of database: 10,329,639
effective search space: 8656237482
effective search space used: 8656237482
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)